ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8xnaA1 - ECOD Domain | ECOD

ECOD/Domains/e8xnaA1

e8xnaA1

UID: 005230879

PDB

Range: A:345-504
PDB: 8XNA chain A(all domains)
UniProt: P34897 (all domains)
Gene: SHMT2

Molecule: Serine hydroxymethyltransferase, mitochondrial (SHMT) (EC 2.1.2.1) (Glycine hydroxymethyltransferase) (Serine methylase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilySHMT(3016.1.1.5)

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 8XNA RCSB PDB: 8XNA PDBe: 8XNA UniProt: P34897

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure