ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8xt1Lm1 - ECOD Domain | ECOD

ECOD/Domains/e8xt1Lm1

e8xt1Lm1

UID: 005233009

PDB

Range: Lm:69-138
PDB: 8XT1 chain Lm(all domains)
UniProt: Q9NYK5 (all domains)
Gene: MRPL39

Molecule: Large ribosomal subunit protein mL39 (39S ribosomal protein L39, mitochondrial) (L39mt) (MRP-L39) (39S ribosomal protein L5, mitochondrial) (L5mt) (MRP-L5)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyTGS(221.1.1.16)

Pfam Families

TGS domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 8XT1 RCSB PDB: 8XT1 PDBe: 8XT1 UniProt: Q9NYK5

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