ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8ybjD1 - ECOD Domain | ECOD

ECOD/Domains/e8ybjD1

e8ybjD1

UID: 005237563

PDB

Range: D:35-128
PDB: 8YBJ chain D(all domains)
UniProt: P06899 (all domains)
Gene: H2BC11

Molecule: Histone H2B type 1-J (Histone H2B.1) (Histone H2B.r) (H2B/r)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Histone →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupHistone(148.1.1)

FFamilyHistone(148.1.1.1)

Pfam Families

PF00125Histone

Core histone H2A/H2B/H3/H4 domain

ClanCL0012Histone

External Links

ECOD PDB View: 8YBJ RCSB PDB: 8YBJ PDBe: 8YBJ UniProt: P06899

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure