ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8yfrK1 - ECOD Domain | ECOD

ECOD/Domains/e8yfrK1

e8yfrK1

UID: 005238676

PDB

Range: K:1-114
PDB: 8YFR chain K(all domains)
UniProt: C4R3Z5 (all domains)
Gene: PAS_chr3_0244

Molecule: RNA polymerase II subunit B12.5

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_L_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L_2(305.1.1.2)

Pfam Families

PF13656RNA_pol_L_2

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 8YFR RCSB PDB: 8YFR PDBe: 8YFR UniProt: C4R3Z5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure