ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1rv1B1 - ECOD Domain | ECOD

ECOD/Domains/e1rv1B1

e1rv1B1

UID: 000052412

PDB

Range: B:25-109
PDB: 1RV1 chain B(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: Ubiquitin-protein ligase E3 Mdm2

3D Structure

Loading viewer...

Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

Cis-[4,5-Bis-(4-Bromophenyl)-2-(2-Ethoxy-4-Methoxyphenyl)-4,5-Dihydroimidazol-1-Yl]-[4-(2-Hydroxyethyl)Piperazin-1-Yl]MethanoneIMZ
drugDrugBank DB02872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 1RV1 RCSB PDB: 1RV1 PDBe: 1RV1 UniProt: Q00987

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure