ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rv1C1 - ECOD Domain | ECOD

ECOD/Domains/e1rv1C1

e1rv1C1

UID: 000052414

PDB

Range: C:25-109
PDB: 1RV1 chain C(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: Ubiquitin-protein ligase E3 Mdm2

3D Structure

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Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

Cis-[4,5-Bis-(4-Bromophenyl)-2-(2-Ethoxy-4-Methoxyphenyl)-4,5-Dihydroimidazol-1-Yl]-[4-(2-Hydroxyethyl)Piperazin-1-Yl]MethanoneIMZ
drugDrugBank DB02872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 1RV1 RCSB PDB: 1RV1 PDBe: 1RV1 UniProt: Q00987

Downloads

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