ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8yykC2 - ECOD Domain | ECOD

ECOD/Domains/e8yykC2

e8yykC2

UID: 005242739

PDB

Range: C:219-382
PDB: 8YYK chain C(all domains)
UniProt: Q8CST0 (all domains)
Gene: rnj2

Molecule: Ribonuclease J 2 (RNase J2) (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNase_J_b_CASP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRNase_J_b_CASP(2004.1.1.231)

Pfam Families

PF22505RNase_J_b_CASP

Ribonuclease J, beta-CASP domain

External Links

ECOD PDB View: 8YYK RCSB PDB: 8YYK PDBe: 8YYK UniProt: Q8CST0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure