ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9b5fA4 - ECOD Domain | ECOD

ECOD/Domains/e9b5fA4

e9b5fA4

UID: 005252692

PDB

Range: A:388-752,A:776-891
PDB: 9B5F chain A(all domains)
UniProt: O94609 (all domains)
Gene: ptr3

Molecule: Ubiquitin-activating enzyme E1 1 (EC 6.2.1.45) (Poly(A)+ RNA transport protein 3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ThiF+UBA_E1_SCCH →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupActivating enzymes of the ubiquitin-like proteins(2003.1.9)

FFamilyThiF+UBA_E1_SCCH(2003.1.9.4)

Pfam Families

ThiF family

ClanCL0063NADP_Rossmann

PF10585UBA_E1_SCCH

Ubiquitin-activating enzyme, SCCH domain

External Links

ECOD PDB View: 9B5F RCSB PDB: 9B5F PDBe: 9B5F UniProt: O94609

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure