ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9b8cF1 - ECOD Domain | ECOD

ECOD/Domains/e9b8cF1

e9b8cF1

UID: 005253576

PDB

Range: F:7-35,F:61-153
PDB: 9B8C chain F(all domains)
UniProt: Q2N0S6 (all domains)
Gene: env

Molecule: Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in GP41 →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 9B8C RCSB PDB: 9B8C PDBe: 9B8C UniProt: Q2N0S6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure