ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9c1i22 - ECOD Domain | ECOD

ECOD/Domains/e9c1i22

e9c1i22

UID: 005259984

PDB

Range: 2:1-48,2:480-776
PDB: 9C1I chain 2(all domains)
UniProt: C3RX20 (all domains)

Molecule: Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]

3D Structure

Loading viewer...

Related Domains

Browse other domains in VP4_helical →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHelical domain in outer capsid protein VP4(3329)

HH-groupHelical domain in outer capsid protein VP4(3329.1)

TT-groupHelical domain in outer capsid protein VP4(3329.1.1)

FFamilyVP4_helical(3329.1.1.1)

Pfam Families

PF17478VP4_helical

Rotavirus VP4 helical domain

External Links

ECOD PDB View: 9C1I RCSB PDB: 9C1I PDBe: 9C1I UniProt: C3RX20

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure