ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9c1j42 - ECOD Domain | ECOD

ECOD/Domains/e9c1j42

e9c1j42

UID: 005260000

PDB

Range: 4:1-48,4:480-776
PDB: 9C1J chain 4(all domains)
UniProt: C3RX20 (all domains)

Molecule: Outer capsid protein VP4 (Hemagglutinin) [Cleaved into: Outer capsid protein VP8*; Outer capsid protein VP5*]

3D Structure

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Related Domains

Browse other domains in VP4_helical →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHelical domain in outer capsid protein VP4(3329)

HH-groupHelical domain in outer capsid protein VP4(3329.1)

TT-groupHelical domain in outer capsid protein VP4(3329.1.1)

FFamilyVP4_helical(3329.1.1.1)

Pfam Families

PF17478VP4_helical

Rotavirus VP4 helical domain

External Links

ECOD PDB View: 9C1J RCSB PDB: 9C1J PDBe: 9C1J UniProt: C3RX20

Downloads

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