ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9d8yF1 - ECOD Domain | ECOD

ECOD/Domains/e9d8yF1

e9d8yF1

UID: 005268805

PDB

Range: F:7-36,F:58-153
PDB: 9D8Y chain F(all domains)
UniProt: Q2N0S5 (all domains)
Gene: env

Molecule: Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]

3D Structure

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Related Domains

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Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupMPER trimer(3567)

HH-groupMPER trimer(3567.1)

TT-groupMPER trimer(3567.1.1)

FFamilyGP41(3567.1.1.2)

Pfam Families

Retroviral envelope protein

External Links

ECOD PDB View: 9D8Y RCSB PDB: 9D8Y PDBe: 9D8Y UniProt: Q2N0S5

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