ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vgyA1 - ECOD Domain | ECOD

ECOD/Domains/e1vgyA1

e1vgyA1

UID: 000005307

RepresentativePDB

Range: A:181-293
PDB: 1VGY chain A(all domains)
UniProt: Q9JYL2 (all domains)
Gene: dapE

Molecule: Succinyl-diaminopimelate desuccinylase (SDAP desuccinylase) (EC 3.5.1.18) (N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase)

3D Structure

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Related Domains

Browse other domains in M20_dimer →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupBacterial exopeptidase dimerisation domain(304.25)

TT-groupBacterial exopeptidase dimerisation domain(304.25.1)

FFamilyM20_dimer(304.25.1.1)

Pfam Families

PF07687M20_dimer

Peptidase dimerisation domain

External Links

ECOD PDB View: 1VGY RCSB PDB: 1VGY PDBe: 1VGY UniProt: Q9JYL2

Downloads

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