ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9nb1I2 - ECOD Domain | ECOD

ECOD/Domains/e9nb1I2

e9nb1I2

UID: 005314648

PDB

Range: I:2-206,I:541-637,I:697-702
PDB: 9NB1 chain I(all domains)
UniProt: Q9P2I0 (all domains)
Gene: CPSF2

Molecule: Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RMMBL,Lactamase_B_6 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyRMMBL,Lactamase_B_6(247.1.1.8)

Pfam Families

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

PF16661Lactamase_B_6

Metallo-beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 9NB1 RCSB PDB: 9NB1 PDBe: 9NB1 UniProt: Q9P2I0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure