ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9o0gD3 - ECOD Domain | ECOD

ECOD/Domains/e9o0gD3

e9o0gD3

UID: 005317815

PDB

Range: D:310-493
PDB: 9O0G chain D(all domains)
UniProt: Q8PUB8 (all domains)
Gene: top6B

Molecule: Type 2 DNA topoisomerase 6 subunit B (EC 5.6.2.2) (Type II DNA topoisomerase VI subunit B) (TopoVI-B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Topo-VIb_trans →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyTopo-VIb_trans(212.1.1.22)

Pfam Families

PF09239Topo-VIb_trans

Topoisomerase VI B subunit, transducer

ClanCL0329S5

External Links

ECOD PDB View: 9O0G RCSB PDB: 9O0G PDBe: 9O0G UniProt: Q8PUB8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure