ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9ymuJ2 - ECOD Domain | ECOD

ECOD/Domains/e9ymuJ2

e9ymuJ2

UID: 005339141

PDB

Range: J:346-515
PDB: 9YMU chain J(all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRNA_pol_Rpb1_2, RNA_pol_Rpb1_3(1.1.2.31)

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

PF04983RNA_pol_Rpb1_3

RNA polymerase Rpb1, domain 3

External Links

ECOD PDB View: 9YMU RCSB PDB: 9YMU PDBe: 9YMU

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure