ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dj0A1 - ECOD Domain | ECOD

ECOD/Domains/e1dj0A1

e1dj0A1

UID: 000005390

RepresentativePDB

Range: A:7-270
PDB: 1DJ0 chain A(all domains)
UniProt: P07649 (all domains)
Gene: truA

Molecule: PSEUDOURIDINE SYNTHASE I

3D Structure

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Related Domains

Browse other domains in PseudoU_synth_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyPseudoU_synth_1(304.102.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01416PseudoU_synth_1

tRNA pseudouridine synthase

ClanCL0649PseudoU_synth

External Links

ECOD PDB View: 1DJ0 RCSB PDB: 1DJ0 PDBe: 1DJ0 UniProt: P07649

Downloads

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