ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dgfD3 - ECOD Domain | ECOD

ECOD/Domains/e1dgfD3

e1dgfD3

UID: 000054037

PDB

Range: D:435-501
PDB: 1DGF chain D(all domains)
UniProt: P04040 (all domains)
Gene: CAT

Molecule: CATALASE

3D Structure

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Related Domains

Browse other domains in Catalase-rel →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSecond alpha-helical domain in heme-dependent catalases(4048)

HH-groupSecond alpha-helical domain in heme-dependent catalases(4048.1)

TT-groupSecond alpha-helical domain in heme-dependent catalases(4048.1.1)

FFamilyCatalase-rel(4048.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06628Catalase-rel

Catalase-related immune-responsive

External Links

ECOD PDB View: 1DGF RCSB PDB: 1DGF PDBe: 1DGF UniProt: P04040

Downloads

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