ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1hmdD1 - ECOD Domain | ECOD

ECOD/Domains/e1hmdD1

e1hmdD1

UID: 000054612

PDB

Range: D:1-113
PDB: 1HMD chain D(all domains)
UniProt: P02246 (all domains)

Molecule: HEMERYTHRIN

3D Structure

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Related Domains

Browse other domains in Hemerythrin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHemerythrin(601.14)

TT-groupHemerythrin(601.14.1)

FFamilyHemerythrin(601.14.1.1)

Ligands

in contact, ≤ 4 Å

Acetyl groupACE

+ 1 additive (Mu-oxo-diiron)

Mu-oxo-diironFEO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01814Hemerythrin

Hemerythrin HHE cation binding domain

External Links

ECOD PDB View: 1HMD RCSB PDB: 1HMD PDBe: 1HMD UniProt: P02246

Downloads

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