ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jnrB1 - ECOD Domain | ECOD

ECOD/Domains/e1jnrB1

e1jnrB1

UID: 000005482

RepresentativePDB

Range: B:2-150
PDB: 1JNR chain B(all domains)
UniProt: O28604 (all domains)
Gene: AF_1669

Molecule: adenylylsulfate reductase

3D Structure

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Related Domains

Browse other domains in Fer4, APS-reductase_C, Fer4_7 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4, APS-reductase_C, Fer4_7(205.1.1.47)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Iron/sulfur clusterSF4

+ 1 additive (Glycerin)

Glycerin

Pfam Families

4Fe-4S binding domain

ClanCL03444Fe-4S

PF12139APS-reductase_C

Adenosine-5'-phosphosulfate reductase beta subunit

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1JNR RCSB PDB: 1JNR PDBe: 1JNR UniProt: O28604

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.