ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1uvkA1 - ECOD Domain | ECOD

ECOD/Domains/e1uvkA1

e1uvkA1

UID: 000055060

PDB

Range: A:491-663
PDB: 1UVK chain A(all domains)
UniProt: P11124 (all domains)
Gene: P2

Molecule: RNA-directed RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_1(4967.1.1.2)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-MonophosphateG
drugDrugBank DB01972within 5 Å only
Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 1UVK RCSB PDB: 1UVK PDBe: 1UVK UniProt: P11124

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

Magnesium ionMG

metal

MANGANESE (II) IONMN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.