ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fgeA3 - ECOD Domain | ECOD

ECOD/Domains/e2fgeA3

e2fgeA3

UID: 000005507

RepresentativePDB

Range: A:272-539
PDB: 2FGE chain A(all domains)
UniProt: Q9LJL3 (all domains)
Gene: PREP1

Molecule: Presequence protease 1, chloroplastic/mitochondrial (AtPreP1) (PreP 1) (EC 3.4.24.-) (Zinc metalloprotease 1) (AtZnMP1)

3D Structure

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Related Domains

Browse other domains in Peptidase_M16_C,M16C_assoc →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16_C,M16C_assoc(309.1.1.5)

Pfam Families

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

PF08367M16C_assoc

Peptidase M16C associated

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 2FGE RCSB PDB: 2FGE PDBe: 2FGE UniProt: Q9LJL3

Downloads

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