ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1bb8A1 - ECOD Domain | ECOD

ECOD/Domains/e1bb8A1

e1bb8A1

UID: 000005967

RepresentativePDB

Range: A:3-73
PDB: 1BB8 chain A(all domains)
UniProt: P22886 (all domains)
Gene: Int-Tn

Molecule: Transposase from transposon Tn916 (Integrase)

3D Structure

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Related Domains

Browse other domains in Integrase_DNA →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA-binding domain(252)

HH-groupGCC-box binding domain-like(252.2)

TT-groupGCC-box binding domain-like(252.2.1)

FFamilyIntegrase_DNA(252.2.1.2)

Pfam Families

PF02920Integrase_DNA

DNA binding domain of tn916 integrase

ClanCL0081MBD-like

External Links

ECOD PDB View: 1BB8 RCSB PDB: 1BB8 PDBe: 1BB8 UniProt: P22886

Downloads

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