ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1avmA1 - ECOD Domain | ECOD

ECOD/Domains/e1avmA1

e1avmA1

UID: 000060514

PDB

Range: A:2-84
PDB: 1AVM chain A(all domains)
UniProt: P80293 (all domains)
Gene: sodA

Molecule: SUPEROXIDE DISMUTASE

3D Structure

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Related Domains

Browse other domains in Sod_Fe_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-groupFe,Mn superoxide dismutase (SOD), N-terminal domain(192.3)

TT-groupFe,Mn superoxide dismutase (SOD), N-terminal domain(192.3.1)

FFamilySod_Fe_N(192.3.1.1)

Ligands

in contact, ≤ 4 Å

Azide ionAZI
FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00081Sod_Fe_N

Iron/manganese superoxide dismutases, alpha-hairpin domain

External Links

ECOD PDB View: 1AVM RCSB PDB: 1AVM PDBe: 1AVM UniProt: P80293

Downloads

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