ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fkwF1 - ECOD Domain | ECOD

ECOD/Domains/e2fkwF1

e2fkwF1

UID: 000061289

PDB

Range: F:1-41
PDB: 2FKW chain F(all domains)
UniProt: P26790 (all domains)

Molecule: Light-harvesting protein B-800/850, beta chain

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
Rhodopin b-D-glucosideRG1

+ 1 additive (Dodecyldimethylamine N-oxide)

Dodecyldimethylamine N-oxide

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 2FKW RCSB PDB: 2FKW PDBe: 2FKW UniProt: P26790

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB04147

Shown in the structure viewer. Drug annotations from DrugDomain.