ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qnaA1 - ECOD Domain | ECOD

ECOD/Domains/e1qnaA1

e1qnaA1

UID: 000006293

RepresentativePDB

Range: A:17-115
PDB: 1QNA chain A(all domains)
UniProt: P28147 (all domains)
Gene: TBP1

Molecule: TATA-box-binding protein 1 (AtTBP1) (TATA sequence-binding protein 1) (TBP-1) (TATA-binding factor 1) (TATA-box factor 1) (Transcription initiation factor TFIID TBP-1 subunit)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupTATA-box binding protein-like(331.1)

TT-groupTATA-box binding protein-like(331.1.1)

FFamilyTBP(331.1.1.1)

Pfam Families

Transcription factor TFIID (or TATA-binding protein, TBP)

ClanCL0407TBP-like

External Links

ECOD PDB View: 1QNA RCSB PDB: 1QNA PDBe: 1QNA UniProt: P28147

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