ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p4dC1 - ECOD Domain | ECOD

ECOD/Domains/e1p4dC1

e1p4dC1

UID: 000064202

PDB

Range: C:1-235,C:267-307
PDB: 1P4D chain C(all domains)
UniProt: P14565 (all domains)
Gene: traI

Molecule: Multifunctional conjugation protein TraI [Includes: DNA relaxase TraI (EC 5.6.2.-) (DNA nickase TraI) (Trans-esterase TraI); DNA helicase I (EC 5.6.2.3) (DNA 5'-3' helicase TraI)]

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupOrigin of replication-binding domains(304.55.1)

FFamilyTrwC(304.55.1.8)

Pfam Families

TrwC relaxase

ClanCL0169Rep

External Links

ECOD PDB View: 1P4D RCSB PDB: 1P4D PDBe: 1P4D UniProt: P14565

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