ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1iwaO1 - ECOD Domain | ECOD

ECOD/Domains/e1iwaO1

e1iwaO1

UID: 000065017

PDB

Range: O:11-149
PDB: 1IWA chain O(all domains)
UniProt: O98949 (all domains)
Gene: rbcL

Molecule: ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

3D Structure

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Related Domains

Browse other domains in RuBisCO_large_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRuBisCO, large subunit, small (N-terminal) domain(304.10)

TT-groupRuBisCO, large subunit, small (N-terminal) domain(304.10.1)

FFamilyRuBisCO_large_N(304.10.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02788RuBisCO_large_N

Ribulose bisphosphate carboxylase large chain, N-terminal domain

External Links

ECOD PDB View: 1IWA RCSB PDB: 1IWA PDBe: 1IWA UniProt: O98949

Downloads

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