ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lk5B1 - ECOD Domain | ECOD

ECOD/Domains/e1lk5B1

e1lk5B1

UID: 000065372

PDB

Range: B:132-209
PDB: 1LK5 chain B(all domains)
UniProt: O50083 (all domains)
Gene: rpiA

Molecule: D-Ribose-5-Phosphate Isomerase

3D Structure

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Related Domains

Browse other domains in Rib_5-P_isom_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupD-ribose-5-phosphate isomerase (RpiA), lid domain(304.30)

TT-groupD-ribose-5-phosphate isomerase (RpiA), lid domain(304.30.1)

FFamilyRib_5-P_isom_A(304.30.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06026Rib_5-P_isom_A

Ribose 5-phosphate isomerase A (phosphoriboisomerase A)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1LK5 RCSB PDB: 1LK5 PDBe: 1LK5 UniProt: O50083

Downloads

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