ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1ntmB2 - ECOD Domain | ECOD

ECOD/Domains/e1ntmB2

e1ntmB2

UID: 000067325

PDB

Range: B:236-439
PDB: 1NTM chain B(all domains)
UniProt: P23004 (all domains)
Gene: UQCRC2

Molecule: Cytochrome b-c1 complex subunit 2, mitochondrial (Complex III subunit 2) (Core protein II) (Ubiquinol-cytochrome-c reductase complex core protein 2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M16_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16_C(309.1.1.4)

Pfam Families

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 1NTM RCSB PDB: 1NTM PDBe: 1NTM UniProt: P23004

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure