ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r6jA1 - ECOD Domain | ECOD

ECOD/Domains/e1r6jA1

e1r6jA1

UID: 000000701

RepresentativePDB

Range: A:192-273
PDB: 1R6J chain A(all domains)
UniProt: O00560 (all domains)
Gene: SDCBP

Molecule: Syntenin 1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 1R6J RCSB PDB: 1R6J PDBe: 1R6J UniProt: O00560

Downloads

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