ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xdnA1 - ECOD Domain | ECOD

ECOD/Domains/e1xdnA1

e1xdnA1

UID: 000007121

RepresentativePDB

Range: A:52-316
PDB: 1XDN chain A(all domains)
UniProt: P86927 (all domains)
Gene: REL1

Molecule: RNA-editing ligase 1, mitochondrial (RNA ligase 1) (EC 6.5.1.3) (TbMP52)

3D Structure

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Related Domains

Browse other domains in RNA_ligase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRNA_ligase(206.1.3.23)

Pfam Families

PF09414RNA_ligase

RNA ligase

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 1XDN RCSB PDB: 1XDN PDBe: 1XDN UniProt: P86927

Downloads

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