ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vdvB3 - ECOD Domain | ECOD

ECOD/Domains/e1vdvB3

e1vdvB3

UID: 000071970

PDB

Range: B:3-92
PDB: 1VDV chain B(all domains)
UniProt: P80457 (all domains)
Gene: XDH

Molecule: Xanthine dehydrogenase/oxidase

3D Structure

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Related Domains

Browse other domains in Fer2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyFer2(221.1.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
FE2/S2 (INORGANIC) CLUSTERFES

+ 1 additive (Glycerol)

Glycerol

Pfam Families

2Fe-2S iron-sulfur cluster binding domain

ClanCL0486Fer2

External Links

ECOD PDB View: 1VDV RCSB PDB: 1VDV PDBe: 1VDV UniProt: P80457

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.