ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r4mJ1 - ECOD Domain | ECOD

ECOD/Domains/e1r4mJ1

e1r4mJ1

UID: 000072081

PDB

Range: J:101-176
PDB: 1R4M chain J(all domains)
UniProt: Q15843 (all domains)
Gene: NEDD8

Molecule: Ubiquitin-like protein NEDD8 (Neddylin) (Neural precursor cell expressed developmentally down-regulated protein 8) (NEDD-8)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 1R4M RCSB PDB: 1R4M PDBe: 1R4M UniProt: Q15843

Downloads

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