ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1s1qD1 - ECOD Domain | ECOD

ECOD/Domains/e1s1qD1

e1s1qD1

UID: 000072105

PDB

Range: D:1-76
PDB: 1S1Q chain D(all domains)
UniProt: P0CG48 (all domains)
Gene: UBC

Molecule: ubiquitin

3D Structure

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Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal

+ 2 additives (Acetic acid, Sulfate ion)

Acetic acidACY
DrugBank DB03166
Sulfate ion

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 1S1Q RCSB PDB: 1S1Q PDBe: 1S1Q UniProt: P0CG48

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.