ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xdqD1 - ECOD Domain | ECOD

ECOD/Domains/e1xdqD1

e1xdqD1

UID: 000072613

PDB

Range: D:19-285
PDB: 1XDQ chain D(all domains)
UniProt: P76342 (all domains)
Gene: msrP

Molecule: Bacterial Sulfite Oxidase

3D Structure

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Related Domains

Browse other domains in Oxidored_molyb →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupSulfite oxidase, middle catalytic domain(221.1.3)

FFamilyOxidored_molyb(221.1.3.1)

Ligands

in contact, ≤ 4 Å

UreaURE
drugDrugBank DB03904
Molybdenum atomMO
metal
PHOSPHONIC ACIDMONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,7,8A,9,10,10A-HEXAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL)ESTER

Pfam Families

PF00174Oxidored_molyb

Oxidoreductase molybdopterin binding domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 1XDQ RCSB PDB: 1XDQ PDBe: 1XDQ UniProt: P76342

Downloads

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Oxygen atomO

Shown in the structure viewer. Drug annotations from DrugDomain.