ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1m5qV2 - ECOD Domain | ECOD

ECOD/Domains/e1m5qV2

e1m5qV2

UID: 000073604

PDB

Range: V:77-137
PDB: 1M5Q chain V(all domains)
UniProt: Q8ZVU2 (all domains)
Gene: PAE2122

Molecule: Small nuclear ribonucleoprotein homolog (Sm-like)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lsm_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupSm-Like archaeal protein Smap3, C-terminal domain(3006)

HH-groupSm-Like archaeal protein Smap3, C-terminal domain(3006.1)

TT-groupSm-Like archaeal protein Smap3, C-terminal domain(3006.1.1)

FFamilyLsm_C(3006.1.1.1)

Pfam Families

Lsm C-terminal

External Links

ECOD PDB View: 1M5Q RCSB PDB: 1M5Q PDBe: 1M5Q UniProt: Q8ZVU2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure