ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2bkrA1 - ECOD Domain | ECOD

ECOD/Domains/e2bkrA1

e2bkrA1

UID: 000007402

RepresentativePDB

Range: A:1-212
PDB: 2BKR chain A(all domains)
UniProt: Q96LD8 (all domains)
Gene: SENP8

Molecule: Sentrin-specific protease 8 (EC 3.4.22.-) (Deneddylase-1) (NEDD8-specific protease 1) (Protease, cysteine 2) (Sentrin/SUMO-specific protease SENP8)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_C48 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C48(219.1.1.16)

Pfam Families

PF02902Peptidase_C48

Ulp1 protease family, C-terminal catalytic domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 2BKR RCSB PDB: 2BKR PDBe: 2BKR UniProt: Q96LD8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure