ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1yq9H4 - ECOD Domain | ECOD

ECOD/Domains/e1yq9H4

e1yq9H4

UID: 000077082

PDB

Range: H:43-85,H:446-494
PDB: 1YQ9 chain H(all domains)
UniProt: P12944 (all domains)
Gene: hydB

Molecule: Periplasmic [NiFe] hydrogenase large subunit (EC 1.12.2.1) (NiFe hydrogenlyase large chain)

3D Structure

Loading viewer...

Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 1YQ9 RCSB PDB: 1YQ9 PDBe: 1YQ9 UniProt: P12944

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure