ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1frvB4 - ECOD Domain | ECOD

ECOD/Domains/e1frvB4

e1frvB4

UID: 000077097

PDB

Range: B:43-85,B:446-494
PDB: 1FRV chain B(all domains)
UniProt: P12944 (all domains)
Gene: hydB

Molecule: HYDROGENASE

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases(244.4.1.2)

Ligands

in contact, ≤ 4 Å

Hydrated feFEL
NICKEL (II) IONNI
metal
Iron/sulfur clusterSF4

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 1FRV RCSB PDB: 1FRV PDBe: 1FRV UniProt: P12944

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.