ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1f06B1 - ECOD Domain | ECOD

ECOD/Domains/e1f06B1

e1f06B1

UID: 000077408

PDB

Range: B:619-768
PDB: 1F06 chain B(all domains)
UniProt: P04964 (all domains)
Gene: ddh

Molecule: MESO-DIAMINOPIMELATE D-DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in DAPDH_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyDAPDH_C(298.1.1.16)

Ligands

in contact, ≤ 4 Å

L-2-Amino-6-Methylene-Pimelic Acid2NP
drugDrugBank DB02892
NADPHNDP
drugDrugBank DB02338

Shown in the structure viewer.

Pfam Families

PF16654DAPDH_C

Diaminopimelic acid dehydrogenase C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 1F06 RCSB PDB: 1F06 PDBe: 1F06 UniProt: P04964

Downloads

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Drug annotations from DrugDomain.