ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1fa0B3 - ECOD Domain | ECOD

ECOD/Domains/e1fa0B3

e1fa0B3

UID: 000077969

PDB

Range: B:5-201
PDB: 1FA0 chain B(all domains)
UniProt: P29468 (all domains)
Gene: PAP1

Molecule: POLY(A)-POLYMERASE

3D Structure

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Related Domains

Browse other domains in PAP_NTPase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyPAP_NTPase(316.1.1.30)

Ligands

in contact, ≤ 4 Å

Cordycepin3AD
drugDrugBank DB12156
Cordycepin Triphosphate3AT
drugDrugBank DB01860

Pfam Families

PF20750PAP_NTPase

Poly(A) polymerase nucleotidyltransferase domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 1FA0 RCSB PDB: 1FA0 PDBe: 1FA0 UniProt: P29468

Downloads

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MANGANESE (II) ION

metal

Shown in the structure viewer. Drug annotations from DrugDomain.