ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j9pB3 - ECOD Domain | ECOD

ECOD/Domains/e2j9pB3

e2j9pB3

UID: 000078798

PDB

Range: B:5-47,B:355-462
PDB: 2J9P chain B(all domains)
UniProt: P39844 (all domains)
Gene: dacC

Molecule: D-alanyl-D-alanine carboxypeptidase DacC

3D Structure

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Related Domains

Browse other domains in Peptidase_S13 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyPeptidase_S13(223.3.1.6)

Ligands

in contact, ≤ 4 Å

D-AlanineDAL
drugDrugBank DB01786
(2R)-2-AMINO-7-{[(1R)-1-CARBOXYETHYL]AMINO}-7-OXOHEPTANOIC ACIDREZ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02113Peptidase_S13

D-Ala-D-Ala carboxypeptidase 3 (S13) family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 2J9P RCSB PDB: 2J9P PDBe: 2J9P UniProt: P39844

Downloads

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