ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vziA2 - ECOD Domain | ECOD

ECOD/Domains/e1vziA2

e1vziA2

UID: 000008043

RepresentativePDB

Range: A:1-37
PDB: 1VZI chain A(all domains)
UniProt: Q46495 (all domains)
Gene: dfx

Molecule: DESULFOFERRODOXIN

3D Structure

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Related Domains

Browse other domains in Desulfoferrod_N →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupDesulforedoxin(375.1.2)

FFamilyDesulfoferrod_N(375.1.2.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
FE (II) IONFE2
metal

Shown in the structure viewer.

Pfam Families

PF06397Desulfoferrod_N

Desulfoferrodoxin, N-terminal domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 1VZI RCSB PDB: 1VZI PDBe: 1VZI UniProt: Q46495

Downloads

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Drug annotations from DrugDomain.