ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qjvB1 - ECOD Domain | ECOD

ECOD/Domains/e1qjvB1

e1qjvB1

UID: 000081104

PDB

Range: B:25-366
PDB: 1QJV chain B(all domains)
UniProt: P0C1A8 (all domains)
Gene: pemA

Molecule: PECTIN METHYLESTERASE

3D Structure

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Related Domains

Browse other domains in Pectinesterase →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectinesterase(207.2.1.4)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01095Pectinesterase

Pectinesterase

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 1QJV RCSB PDB: 1QJV PDBe: 1QJV UniProt: P0C1A8

Downloads

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