ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t60J1 - ECOD Domain | ECOD

ECOD/Domains/e1t60J1

e1t60J1

UID: 000081975

PDB

Range: J:6-114
PDB: 1T60 chain J(all domains)

Molecule: type iv collagen

3D Structure

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Related Domains

Browse other domains in C4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupNoncollagenous (NC1) domain of collagen IV(352)

HH-groupNoncollagenous (NC1) domain of collagen IV(352.1)

TT-groupNoncollagenous (NC1) domain of collagen IV(352.1.1)

FFamilyC4(352.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

C-terminal tandem repeated domain in type 4 procollagen

ClanCL0056C_Lectin

External Links

ECOD PDB View: 1T60 RCSB PDB: 1T60 PDBe: 1T60

Downloads

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