ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2nqgA1 - ECOD Domain | ECOD

ECOD/Domains/e2nqgA1

e2nqgA1

UID: 000082566

PDB

Range: A:33-354
PDB: 2NQG chain A(all domains)
UniProt: P97571 (all domains)
Gene: Capn1

Molecule: Calpain-1 catalytic subunit

3D Structure

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Related Domains

Browse other domains in Peptidase_C2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C2(219.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
5-AZANYLIDYNE-N-[(2S)-4-ETHOXY-2-HYDROXY-4-OXOBUTANOYL]-L-NORVALYL-L-ARGINYL-L-TRYPTOPHANAMIDENQG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00648Peptidase_C2

Calpain family cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 2NQG RCSB PDB: 2NQG PDBe: 2NQG UniProt: P97571

Downloads

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