ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dsqA1 - ECOD Domain | ECOD

ECOD/Domains/e1dsqA1

e1dsqA1

UID: 000008570

RepresentativePDB

Range: A:27-47
PDB: 1DSQ chain A(all domains)
UniProt: P11284 (all domains)
Gene: gag

Molecule: Gag polyprotein [Cleaved into: Matrix protein p10; Phosphorylated protein pp21; Protein p3; Protein p8; Protein n; Capsid protein p27; Nucleocapsid protein p14]

3D Structure

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Related Domains

Browse other domains in zf-CCHC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupRetrovirus zinc finger-related domains(396.1)

TT-groupRetrovirus zinc finger-related domains(396.1.1)

FFamilyzf-CCHC(396.1.1.1)

Pfam Families

PF00098zf-CCHC

Zinc knuckle

ClanCL0511Retroviral_zf

External Links

ECOD PDB View: 1DSQ RCSB PDB: 1DSQ PDBe: 1DSQ UniProt: P11284

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