ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1ndoE3 - ECOD Domain | ECOD

ECOD/Domains/e1ndoE3

e1ndoE3

UID: 000089361

PDB

Range: E:79-134
PDB: 1NDO chain E(all domains)
UniProt: P0A110 (all domains)
Gene: ndoB

Molecule: NAPHTHALENE 1,2-DIOXYGENASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rieske →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrm112p-like(4294)

HH-groupTrm112p-like(4294.1)

TT-groupTrm112p-like(4294.1.1)

FFamilyRieske(4294.1.1.1)

Ligands

in contact, ≤ 4 Å

FE2/S2 (INORGANIC) CLUSTERFES

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Rieske [2Fe-2S] domain

ClanCL0516ISP-domain

External Links

ECOD PDB View: 1NDO RCSB PDB: 1NDO PDBe: 1NDO UniProt: P0A110

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure