ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ippB1 - ECOD Domain | ECOD

ECOD/Domains/e1ippB1

e1ippB1

UID: 000089918

PDB

Range: B:2-163
PDB: 1IPP chain B(all domains)
UniProt: Q94702 (all domains)

Molecule: INTRON-ENCODED ENDONUCLEASE I-PPOI

3D Structure

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Related Domains

Browse other domains in zf-His_Me_endon →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupHis-Me finger endonucleases(378)

HH-groupHis-Me finger endonucleases(378.1)

TT-groupHis-Me finger endonucleases(378.1.1)

FFamilyzf-His_Me_endon(378.1.1.6)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05551zf-His_Me_endon

Zinc-binding loop region of homing endonuclease

ClanCL0263His-Me_finger

External Links

ECOD PDB View: 1IPP RCSB PDB: 1IPP PDBe: 1IPP UniProt: Q94702

Downloads

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